Totalseq hashtagの配列
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Totalseq A |
Read 2 GTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT (PCR handle), and BAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA*A*A (capture sequence). |
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Totalseq B |
Read2 GTGACTGGAGTTCAGACGTGTGCTCTTCCGATCTNNNNNNNNNN (barcode) NNNNNNNNNGCTTTAAGGCCGGTCCTAGC*A*A (capture sequence) |
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Totalseq C |
CGGAGATGTGTATAAGAGACAGNNNNNNNNNN (barcode)NNNNNNNNNCCCATATAAGA*A*A |
10x Gel beadにくっついているBarcode
RNA用
Truseq read 1
CTACACGACGCTCTTCCGATCT-N16-N12-TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTVN-3’
Feature barcode用
Nextera read 1
GTCAGATGTGTATAAGAGACAG-N16-N12-TTGCTAGGACCGGCCTTAAAGC-3
Template switching oligo
-AAGCAGTGGTATCAACGCAGAGTACATrGrGrG-3