Totalseq hashtagの配列

Totalseq A

Read 2

GTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT (PCR handle), and BAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA*A*A (capture sequence).

Totalseq B

Read2

GTGACTGGAGTTCAGACGTGTGCTCTTCCGATCTNNNNNNNNNN (barcode) NNNNNNNNNGCTTTAAGGCCGGTCCTAGC*A*A (capture sequence)

Totalseq C

CGGAGATGTGTATAAGAGACAGNNNNNNNNNN (barcode)NNNNNNNNNCCCATATAAGA*A*A

10x Gel beadにくっついているBarcode

RNA用

Truseq read 1

CTACACGACGCTCTTCCGATCT-N16-N12-TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTVN-3’

Feature barcode用

Nextera read 1

GTCAGATGTGTATAAGAGACAG-N16-N12-TTGCTAGGACCGGCCTTAAAGC-3

Template switching oligo

-AAGCAGTGGTATCAACGCAGAGTACATrGrGrG-3

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